#################################### ### Log file for DDRP v2 ### #################################### BASE DIR: /data/PRISM/ WORKING DIR: /data/PRISM/2020 EXISTING OUTPUT DIR: /home/httpd/html/dodtmp/2379; removing all files PARAMETER AND SETTINGS SETUP: getting parameters to use in model Species params: /usr/local/dds/DDRP_DOD/ddrp_v2/spp_params/APH.params Reading params for species: APH Fullname: Aphalara itadori METADATA: creating metadata file for all inputs used in model Done writing metadata file PRISM DATA PROCESSING Finished loading PRISM files for 230 days Creating template file for WA Cropping tmax and tmin tiles for WA Done processing PRISM data DAILY LOOP Sampling every 30 days between 20200516 and 20201231 Running daily loop for cohorts 1 2 3 4 5 6 Daily loop done (run time = 0.31 min) FINAL ANALYSES AND MAP PRODUCTION ### SUMMARY MAPS: DDTOTAL ### Saving summary map: Misc_output/DDtotal_20200714.png - Number of accumulated degree-days on 07/14/2020 Saving summary map: Misc_output/DDtotal_20200813.png - Number of accumulated degree-days on 08/13/2020 Saving summary map: Misc_output/DDtotal_20200912.png - Number of accumulated degree-days on 09/12/2020 Saving summary map: Misc_output/DDtotal_20200907.png - Number of accumulated degree-days on 09/07/2020 Saving summary map: Misc_output/DDtotal_20201111.png - Number of accumulated degree-days on 11/11/2020 Saving summary map: Misc_output/DDtotal_20200614.png - Number of accumulated degree-days on 06/14/2020 Saving summary map: Misc_output/DDtotal_20201012.png - Number of accumulated degree-days on 10/12/2020 Saving summary map: Misc_output/DDtotal_20201231.png - Number of accumulated degree-days on 12/31/2020 Saving summary map: Misc_output/DDtotal_20201211.png - Number of accumulated degree-days on 12/11/2020 Done with DDtotal maps ### RASTER AND SUMMARY MAP OUTPUTS: STAGE COUNT ### Saving summary map: StageCount_20200614.png - Stage count on 06/14/2020 Saving summary map: StageCount_20200714.png - Stage count on 07/14/2020 Saving summary map: StageCount_20200813.png - Stage count on 08/13/2020 Saving summary map: StageCount_20200912.png - Stage count on 09/12/2020 Saving summary map: StageCount_20201231.png - Stage count on 12/31/2020 Saving summary map: StageCount_20201012.png - Stage count on 10/12/2020 Saving summary map: StageCount_20201111.png - Stage count on 11/11/2020 Saving summary map: StageCount_20201211.png - Stage count on 12/11/2020 Saving summary map: StageCount_20200907.png - Stage count on 09/07/2020 Done with raster and summary map outputs for StageCount ### RASTER AND SUMMARY MAP OUTPUTS: PEST EVENT MAPS ### Saving raster: Avg_PEMp2_20201231.tif - Avg. date of 2nd gen. adult emergence Saving raster: Avg_PEMp1_20201231.tif - Avg. date of 1st gen. adult emergence Saving summary map: Avg_PEMp2_20201231.png - Avg. date of 2nd gen. adult emergence Saving summary map: Avg_PEMp1_20201231.png - Avg. date of 1st gen. adult emergence Saving raster: Earliest_PEMp2_20201231.tif - Earliest date of 2nd gen. adult emergence Saving raster: Earliest_PEMp1_20201231.tif - Earliest date of 1st gen. adult emergence Saving summary map: Earliest_PEMp2_20201231.png - Earliest date of 2nd gen. adult emergence Saving summary map: Earliest_PEMp1_20201231.png - Earliest date of 1st gen. adult emergence Done with Pest Event Maps ### WEIGHTED RASTER AND SUMMARY MAP OUTPUTS: LIFESTAGE ### Stages: OA, E, L, P, A Saving raster brick: Misc_output/OWadult.tif - OWadult relative pop. size for all 9 dates Saving raster brick: Misc_output/Pupae.tif - Pupae relative pop. size for all 9 dates Saving raster brick: Misc_output/Egg.tif - Egg relative pop. size for all 9 dates Saving raster brick: Misc_output/Larvae.tif - Larvae relative pop. size for all 9 dates Saving summary map: Misc_output/OWadult_20200614.png - OWadult relative pop. size on 06/14/2020 Saving raster brick: Misc_output/Adult.tif - Adult relative pop. size for 9 dates Saving summary map: Misc_output/Pupae_20200614.png - Pupae relative pop. size on 06/14/2020 Saving summary map: Misc_output/Egg_20200614.png - Egg relative pop. size on 06/14/2020 Saving summary map: Misc_output/Larvae_20200614.png - Larvae relative pop. size on 06/14/2020 Saving summary map: Misc_output/Adult_20200614.png - Adult relative pop. size on 06/14/2020 Saving summary map: Misc_output/OWadult_20200714.png - OWadult relative pop. size on 07/14/2020 Saving summary map: Misc_output/Pupae_20200714.png - Pupae relative pop. size on 07/14/2020 Saving summary map: Misc_output/OWadult_20200813.png - OWadult relative pop. size on 08/13/2020 Saving summary map: Misc_output/Egg_20200714.png - Egg relative pop. size on 07/14/2020 Saving summary map: Misc_output/OWadult_20200907.png - OWadult relative pop. size on 09/07/2020 Saving summary map: Misc_output/Pupae_20200813.png - Pupae relative pop. size on 08/13/2020 Saving summary map: Misc_output/Larvae_20200714.png - Larvae relative pop. size on 07/14/2020 Saving summary map: Misc_output/Adult_20200714.png - Adult relative pop. size on 07/14/2020 Saving summary map: Misc_output/Egg_20200813.png - Egg relative pop. size on 08/13/2020 Saving summary map: Misc_output/OWadult_20200912.png - OWadult relative pop. size on 09/12/2020 Saving summary map: Misc_output/Pupae_20200907.png - Pupae relative pop. size on 09/07/2020 Saving summary map: Misc_output/Larvae_20200813.png - Larvae relative pop. size on 08/13/2020 Saving summary map: Misc_output/Adult_20200813.png - Adult relative pop. size on 08/13/2020 Saving summary map: Misc_output/OWadult_20201012.png - OWadult relative pop. size on 10/12/2020 Saving summary map: Misc_output/Egg_20200907.png - Egg relative pop. size on 09/07/2020 Saving summary map: Misc_output/Pupae_20200912.png - Pupae relative pop. size on 09/12/2020 Saving summary map: Misc_output/OWadult_20201111.png - OWadult relative pop. size on 11/11/2020 Saving summary map: Misc_output/Larvae_20200907.png - Larvae relative pop. size on 09/07/2020 Saving summary map: Misc_output/Adult_20200907.png - Adult relative pop. size on 09/07/2020 Saving summary map: Misc_output/Egg_20200912.png - Egg relative pop. size on 09/12/2020 Saving summary map: Misc_output/OWadult_20201211.png - OWadult relative pop. size on 12/11/2020 Saving summary map: Misc_output/Pupae_20201012.png - Pupae relative pop. size on 10/12/2020 Saving summary map: Misc_output/Larvae_20200912.png - Larvae relative pop. size on 09/12/2020 Saving summary map: Misc_output/Adult_20200912.png - Adult relative pop. size on 09/12/2020 Saving summary map: Misc_output/Egg_20201012.png - Egg relative pop. size on 10/12/2020 Saving summary map: Misc_output/OWadult_20201231.png - OWadult relative pop. size on 12/31/2020 Saving summary map: Misc_output/Pupae_20201111.png - Pupae relative pop. size on 11/11/2020 Saving summary map: Misc_output/Larvae_20201012.png - Larvae relative pop. size on 10/12/2020 Saving summary map: Misc_output/Adult_20201012.png - Adult relative pop. size on 10/12/2020 Saving summary map: Misc_output/Egg_20201111.png - Egg relative pop. size on 11/11/2020 Saving summary map: Misc_output/Pupae_20201211.png - Pupae relative pop. size on 12/11/2020 Saving summary map: Misc_output/Larvae_20201111.png - Larvae relative pop. size on 11/11/2020 Saving summary map: Misc_output/Adult_20201111.png - Adult relative pop. size on 11/11/2020 Saving summary map: Misc_output/Egg_20201211.png - Egg relative pop. size on 12/11/2020 Saving summary map: Misc_output/Pupae_20201231.png - Pupae relative pop. size on 12/31/2020 Saving summary map: Misc_output/Larvae_20201211.png - Larvae relative pop. size on 12/11/2020 Saving summary map: Misc_output/Adult_20201211.png - Adult relative pop. size on 12/11/2020 Saving summary map: Misc_output/Egg_20201231.png - Egg relative pop. size on 12/31/2020 Saving summary map: Misc_output/Larvae_20201231.png - Larvae relative pop. size on 12/31/2020 Saving summary map: Misc_output/Adult_20201231.png - Adult relative pop. size on 12/31/2020 Done with weighted raster summary map outputs for Lifestage ### WEIGHTED RASTER OUTPUT: NUMGEN ### Saving raster brick: Gen_0_cohort1.tif - Gen. 0 for all 9 dates Saving raster brick: Gen_0_cohort4.tif - Gen. 0 for all 9 dates Saving raster brick: Gen_0_cohort2.tif - Gen. 0 for all 9 dates Saving raster brick: Gen_0_cohort3.tif - Gen. 0 for all 9 dates Saving raster brick: Gen_0_cohort5.tif - Gen. 0 for all 9 dates Saving raster brick: Gen_0_cohort6.tif - Gen. 0 for all 9 dates Saving raster brick: Gen_1_cohort1.tif - Gen. 1 for all 9 dates Saving raster brick: Gen_1_cohort2.tif - Gen. 1 for all 9 dates Saving raster brick: Gen_1_cohort3.tif - Gen. 1 for all 9 dates Saving raster brick: Gen_1_cohort4.tif - Gen. 1 for all 9 dates Saving raster brick: Gen_1_cohort5.tif - Gen. 1 for all 9 dates Saving raster brick: Gen_1_cohort6.tif - Gen. 1 for all 9 dates Saving raster brick: Gen_2_cohort1.tif - Gen. 2 for all 9 dates Saving raster brick: Gen_2_cohort2.tif - Gen. 2 for all 9 dates Saving raster brick: Gen_2_cohort3.tif - Gen. 2 for all 9 dates Saving raster brick: Gen_2_cohort4.tif - Gen. 2 for all 9 dates Saving raster brick: Gen_2_cohort5.tif - Gen. 2 for all 9 dates Saving raster brick: Gen_3_cohort1.tif - Gen. 3 for all 9 dates Saving raster brick: Gen_2_cohort6.tif - Gen. 2 for all 9 dates Saving raster brick: Gen_3_cohort2.tif - Gen. 3 for all 9 dates Saving raster brick: Gen_3_cohort3.tif - Gen. 3 for all 9 dates Saving raster brick: Gen_3_cohort5.tif - Gen. 3 for all 9 dates Saving raster brick: Gen_3_cohort4.tif - Gen. 3 for all 9 dates Saving raster brick: Gen_3_cohort6.tif - Gen. 3 for all 9 dates Saving raster brick: Misc_output/Gen_0.tif - Gen. 0 for all 9 dates Saving raster brick: Misc_output/Gen_2.tif - Gen. 2 for all 9 dates Saving raster brick: Misc_output/Gen_3.tif - Gen. 3 for all 9 dates Saving raster brick: Misc_output/Gen_1.tif - Gen. 1 for all 9 dates Done with weighted raster outputs for NumGen ### SUMMARY MAP OUTPUT: NUMGEN ### Saving summary map: NumGen_20200813.png - Numbers of generations on 08/13/2020 Saving summary map: NumGen_20201111.png - Numbers of generations on 11/11/2020 Saving summary map: NumGen_20200912.png - Numbers of generations on 09/12/2020 Saving summary map: NumGen_20200614.png - Numbers of generations on 06/14/2020 Saving summary map: NumGen_20201211.png - Numbers of generations on 12/11/2020 Saving summary map: NumGen_20200907.png - Numbers of generations on 09/07/2020 Saving summary map: NumGen_20201012.png - Numbers of generations on 10/12/2020 Saving summary map: NumGen_20200714.png - Numbers of generations on 07/14/2020 Saving summary map: NumGen_20201231.png - Numbers of generations on 12/31/2020 Done with summary maps for NumGen ### ANALYSIS: LIFESTAGE WITH NUMBER OF GENS. ### Saving raster brick: Mismatch_cohort5.tif Mismatch Saving raster brick: Mismatch_cohort6.tif Mismatch Saving raster brick: Mismatch_cohort3.tif Mismatch Saving raster brick: Mismatch_cohort2.tif Mismatch Saving raster brick: Mismatch_cohort1.tif Mismatch Saving raster brick: Mismatch_cohort4.tif Mismatch Saving raster brick: AttVolt_all_weighted.tif Saving raster brick: Diapause_all_weighted.tif Saving raster brick: FullVolt_all_weighted.tif Saving raster brick: Mismatch_all_weighted.tif ### SUMMARY MAP OUTPUT - Diapause ### ### Done w/ final analyses and map production ### Run time for analyses and map production = 2.09 min Deleting, renaming, and moving miscellaneous files Renamed all final PNG files to include APH in file name MODEL RUN DONE Run time for entire model = 2.64 min